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Category: perception

Signal detection

By Hugo Schouppe, 2009-10-27 00:40

As a researcher, you sometimes has to answer questions like “how accurate is this particular test in detecting a specific disorder” or “how sensitive is this (imaging) device to  reveal a certain condition like breast cancer” or “how good is this test to predict later success, for example in higher education”. Like so many questions in science and psychology, the answer is no that simple.

A theory, called “signal detection theory” (SDT) can help. One of the pioneers, J.A. Swets, has published a very well written article in Scientific American. An unabridged and more difficult version can be downloaded [full text]  from  psychologicalscience.org. You can also find some visual explanations on the website anaesthetist.com. The following Excel workbook gives you the possibility to experiment  with the dice-game example from the handbook. You can also download the PASW dataset. Maybe, you want to use the Web-based Calculator for ROC Curves to calculate and draw the ROC curves.

Suppose that you do the following experiment. A group of children is presented with a  list of words and instructed to memorize them.  After that, they receive a second list with old words (previously presented) and new words intermingled (not previously showed but related). For each word they have to indicate how confident they are that the particular word is an OLD word on a 5-point rating scale (1 – Definitely negative to 5 – Definitely positive) and to make a response (OLD or NEW). Each child receives five lists. Some fictitious cases are presented in the following table (click to enlarge or download Excel-file).

Results of fictitious signal detection experiment

In the first list, the subject 1 recognizes the first word correctly as an old (previously showed) word and is rather confident about it. The second word is also correctly identified as a new word but the child has doubts and is rather negative that is an old word. With the third word, the child makes a mistake and falsely recognizes a new word as an old one. The child is also confident that it is an old word. How accurate is this child in remembering?

In terms of signal detection, you can distinguish 4 situations. The correct responses are given by the true-positives and true-negatives; the incorrect responses by the false-positives and false-negatives.

signal is detected
(ss recognize the word)
signal is not detected
(ss does not recognize the word)
signal is present
(OLD word)

true-positive

(hit)

false-negative

(miss)

signal is NOT present
(NEW word)

false-positive

(false alarm)

true-negative

(correct rejection)

What about a subject that has a high hit rate (true-positive probability). In the first list of the example, the child has a hit rate of 100% (4/4); every old word that is presented is recognized as such. Does this subject remember the words accurately? On first thought, our answer should be “yes”. The subject remembers the old words in all cases. This is quite a good performance.  The subject, however, recognizes also 1 new word as old (1/6 = 17%).The hit rate is very high but the false alarm rate is also substantial. In fact, a high hit rate can be obtained very easily by saying most of the time “OLD”, regardless if you remember or not the actual word. This is quite the opposite of a good performance.

Receiver Operating CharacteristicIn fact, several combinations are possible. They are visualized by a ROC-graph (Receiver Operating Characteristic). The X-axis represents the false-positives probability. The Y-axis shows the true-positives probability. The data points are:

FPP       TPP
0,000    0,000
0,040    0,400
0,080    0,760
0,200    0,880
0,560    0,960
1,000    1,000

Suppose that our subject only wants to respond OLD when his confidence rating is more than 5. He will have zero true-positives (word = old and response = old) and zero false-positives (word = new and response = old), simply because he never reponds OLD.  This is the first data point. Suppose that his cut-off value or criterion is 5  How many true-positives will he have (all five lists)? The combination word status= 1 and confidence = 5 appears 10 times on a total of 25 OLD words. This is a true-positive probability of 0.4. The false-positive probability is 0.04 (=1/25; third word in list 1). This is the second data point in our ROC-curve.

In our example the subject has 20 out of 25 times recognized the old word (TPP=0.8) and has 5 times responded old when in fact it was a new word (FPP=0.2). So, our subject has an implicit cut-off value of 3. When his confidence rate was 3, 4, 5 or more he responded OLD, creating 20% false alarms and 80% hits.

Receptive fields

By Hugo Schouppe, 2009-10-26 21:25

A receptive field is a set of receptors that controls a neuron. Some neurons have a receptive field of only one receptor, some neurons have receptive fields of several hundreds of receptors.

The retina contains rods and cones, which are connected to the neurons in the laterale geniculate nucleus (LGN) through the optic nerve. Each eye counts approximately 120 000 000 rods and 6 000 000 cones. The optic nerve counts about 1 000 000 nerve fibers. So, there is an average convergence of 126 receptors to one nerve fiber, and thus neuron in the LGN.

Convergence of receptors to LNG

Of course, this is an average and the size of the receptive field varies according to the position in the retina. In the peripheral part of the retina the receptive fields are quite large. The central part (the fovea) contains very small receptive fields; meaning that very few receptors are aggregated to one neuron in the LGN.

The shape of the receptive fields in the retina resembles a donut with a centre and a surround. When light falls on the center, the neuron in yhe LGN will be excited (fires more). When light falls on the surround, the neuron is inhibited (fires less). If light falls on both the center and the surround or outside the receptive field, nothing happens with the ganglion cell.

Stimulatiuon of receptive field

Stimulatiuon of receptive field

The human visual system

By Hugo Schouppe, 2009-10-13 22:11

There is a lot of information about the human visual system on the internet. This post will point you to some of the most interesting and innovating websites. Please, feel free to comment or add some links.

Perhaps the most comprehensive site about the human eye is Webvision from the University of Utah. The retina is covered in considerable depth (anatomy, physiology, biochemistry, retinal circuits); see for example the very well written text “How the retina works” (pdf); published in American Scientist (2003) by one of the authors.  The website is also bundled as an electronic book, which is perhaps easier to consult via the  pubMed website.

At the Vrije Universiteit Amsterdam you can find a website that is entirely devoted to the anatomy of the human eye with very nice and annotated pictures (language is Dutch). The anatomy of the eye is also very nicely illustrated in a video lecture from Ophtobook.com.

The human visual cortex is described in extenso in the article of Grill-Spector & Malach (2004) in the Annual Review of Neuroscience. You can find a full-text copy of the article on the website of the first author (http://www-psych.stanford.edu/~kalanit/publications.htm on 14-04-2009).

Of course, you can also read the online book “Eye, brain and vision” from the Nobel prize winner David Hubel. Here, you will find a in-depth account of the visual pathway. A more recent approach is described by Peter Lennie. You can download a full-text copy of his important articles from his website (1998 - 2003)

The Journal of Vision is an online, free access journal that is entirely dedicated to research about vision. All articles are full-text consultable. This is, of course, a very specialised journal. Lots of pictures about human vision can be found at ViperLib.

More information about the optics of the eye can be found at the HyperPhysics website of  the George State Universiy.

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